Stem-loop lja-MIR11082j

Accession

MI0035773

Description

Lotus japonicus lja-MIR11082j precursor miRNA

Sequence

ucccaccuauagcuuuuugugugguuucuuacgggaauCACAGAGAGUUGGUUGGACUuaggaggucuuguuucaggccgauuggga
((((......((((........))))......)))).........((((((((((((((...)))))).......))))))))....

Structure

ucccaccuauagcuuuuugugugguuucuuacgggaauCACAGAG        -------      a 
                                             AGUUGGUU       GGACUu  
                                             ||||||||       |||||| g
                                             uuagccgg       ucugga  
-----------------------------------------aggg        acuuugu      g 

Annotation confidence Not enough data

Genome context

Chr0: 1806137-1806223 [+]

Mature lja-miR11082j-3p

• Accession: MIMAT0043745
• Description: Lotus japonicus lja-miR11082j-3p mature miRNA
• Sequence: 39 - CACAGAGAGUUGGUUGGACU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256