Accession
MI0035802
Description
Lotus japonicus
lja-MIR11089b precursor miRNA
Sequence
498
reads,
55.0
reads per million, 9 experiments
ccgucacuuuacguugauuagaaagaccuaaaccaaugaaccuugauuuuagagagacguaagacauGAUAAAAAUUGAGUUUUAGGUCCUCuaaaaucauggUUCUUUGGUUUAGGUCCCUCUaaaaucaugguuccuugg
....((....((..((((((((..((((((((((((.(((((.(((((((((((.(((.((((((.((((....)))).)))))).)))))))))))))).))))).))))))))))))..))))..))))..))....)).
....((....((..((((((((..((((((((((((.(((((.(((((((((((.(((.((((((.((((....)))).)))))).)))))))))))))).))))).))))))))))))..))))..))))..))....)).
Structure
ccgu cuuu gu -- aa u u a g a A
ca ac ugau uaga gaccuaaaccaa gaacc ugauuuuagag gac uaagac uGAU A
|| || |||| |||| |||||||||||| ||||| ||||||||||| ||| |||||| ||||
gu ug acua aUCU CUGGAUUUGGUU CUUgg acuaaaauCUC CUG AUUUUG GUUA A
---g uccu gu aa CC U u - G A A
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
Chr4: 12695326-12695467 [+]
Database links
Mature lja-miR11089b-5p
| Accession | MIMAT0054652 |
| Description | Lotus japonicus lja-miR11089b-5p mature miRNA |
| Sequence | 68 - GAUAAAAAUUGAGUUUUAGGUCCUC - 92 |
| Evidence |
experimental
unknown |
Mature lja-miR11089b-3p
| Accession | MIMAT0043782 |
| Description | Lotus japonicus lja-miR11089b-3p mature miRNA |
| Sequence | 104 - UUCUUUGGUUUAGGUCCCUCU - 124 |
| Evidence |
experimental
Illumina [1] |
References
|
