Accession
MI0035811
Description
Lotus japonicus
lja-MIR11100 precursor miRNA
Sequence
2155
reads,
369.0
reads per million, 8 experiments
ggUUUGGCACCCCACCUAUUGGguuucgcaccccacuuuauuaaaaacgggaauuuaaauuccgauuuuaauacgaaaaaaacggaaauuaaaaaaccguuauguauuuuagcauauguggcacauuuucaaccguucauugcauauaaaaaacaaaucggaauuuuaaauuccguuuugaaaacggaaauuaaauuUCCGUAUUGAAUACAUGGGGUGCCAaacccaauagguggggugccaaacc
((((((((((((((((((((((((((.((((((((...((((.((.((((((((((((.(((((.((((((.........(((((((.((((((..(((...(((.((((((((.((((((...........)))..))))))...))))).)))...)))..)))))).))))))))))))).))))).)))))))))))).)).))))..)))))))).))))))))))))))))))))))))))
((((((((((((((((((((((((((.((((((((...((((.((.((((((((((((.(((((.((((((.........(((((((.((((((..(((...(((.((((((((.((((((...........)))..))))))...))))).)))...)))..)))))).))))))))))))).))))).)))))))))))).)).))))..)))))))).))))))))))))))))))))))))))
Structure
c cuu a a a a uacgaaaaa a aa uua a --- u -- caca
ggUUUGGCACCCCACCUAUUGGguuu gcacccca uauu aa acgggaauuuaa uuccg uuuuaa aacggaa uuaaaa ccg ugu uuuua gca aug ugg u
|||||||||||||||||||||||||| |||||||| |||| || |||||||||||| ||||| |||||| ||||||| |||||| ||| ||| ||||| ||| ||| ||| u
ccaaaccgugggguggauaacccaaA CGUGGGGU AUAA UU UGCCUuuaaauu aaggc aaaguu uugccuu aauuuu ggc aca aaaau cgu uac gcc u
C -AC G A a a --------- a aa uaa a aua - uu aacu
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
Chr2: 2473704-2473950 [-]
Database links
Mature lja-miR11100-5p
| Accession | MIMAT0043794 |
| Description | Lotus japonicus lja-miR11100-5p mature miRNA |
| Sequence | 3 - UUUGGCACCCCACCUAUUGG - 22 |
| Evidence |
experimental
Illumina [1] |
Mature lja-miR11100-3p
| Accession | MIMAT0043795 |
| Description | Lotus japonicus lja-miR11100-3p mature miRNA |
| Sequence | 198 - UCCGUAUUGAAUACAUGGGGUGCCA - 222 |
| Evidence |
experimental
Illumina [1] |
References
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