Stem-loop lja-MIR11105c

Accession

MI0035823

Description

Lotus japonicus lja-MIR11105c precursor miRNA

Sequence

gGUAAGAUUGGAUACUCUCACCacaaauugugugagguagacaauguuauuu
.((((.((((..(((.(((((.(((...)))))))))))..)))).))))..

Structure

-g    G    GA   U     C   a 
  GUAA AUUG  UAC CUCAC aca  
  |||| ||||  ||| ||||| ||| a
  uauu uaac  aug gagug ugu  
uu    g    ag   -     -   u 

Annotation confidence Not enough data

Genome context

Chr5: 3833721-3833772 [+]

Mature lja-miR11105c-5p

• Accession: MIMAT0043809
• Description: Lotus japonicus lja-miR11105c-5p mature miRNA
• Sequence: 2 - GUAAGAUUGGAUACUCUCACC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256