Stem-loop lja-MIR11106

Accession

MI0035825

Description

Lotus japonicus lja-MIR11106 precursor miRNA

Sequence

ucUUAUCAUAUCCUGUGUUUGAGgugcacaugaUAAGAACAGGAUAUGAUAAGG
.(((((((((((((((.((((..((....))..)))).))))))))))))))).

Structure

u               G    AG  g 
 cUUAUCAUAUCCUGU UUUG  gu c
 ||||||||||||||| ||||  ||  
 GAAUAGUAUAGGACA GAAU  ua a
G               A    ag  c 

Annotation confidence Not enough data

Genome context

Chr0: 32160409-32160462 [+]

Mature lja-miR11106-5p

• Accession: MIMAT0043811
• Description: Lotus japonicus lja-miR11106-5p mature miRNA
• Sequence: 3 - UUAUCAUAUCCUGUGUUUGAG - 23
• Evidence: experimental ; Illumina [1]

Mature lja-miR11106-3p

• Accession: MIMAT0043812
• Description: Lotus japonicus lja-miR11106-3p mature miRNA
• Sequence: 34 - UAAGAACAGGAUAUGAUAAGG - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256