Stem-loop lja-MIR11129

Accession

MI0035876

Description

Lotus japonicus lja-MIR11129 precursor miRNA

Sequence

guuuuucuauauauguaauauaaaucuuguuucaaaucuuUAUUAUUCUGUUUAUGGAAGGC
..(((((((((.(((.((((((((..((......))..)))).)))).))).))))))))).

Structure

gu         u   u    -    uc  gu 
  uuuucuaua aug aaua uaaa  uu  u
  ||||||||| ||| |||| ||||  ||   
  GGAAGGUAU UGU UUAU AUuu  aa  u
-C         U   C    U    cu  ac 

Annotation confidence Not enough data

Genome context

Chr4: 23349736-23349797 [+]

Mature lja-miR11129-3p

• Accession: MIMAT0043884
• Description: Lotus japonicus lja-miR11129-3p mature miRNA
• Sequence: 41 - UAUUAUUCUGUUUAUGGAAGGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256