Stem-loop lja-MIR11141

Accession

MI0035900

Description

Lotus japonicus lja-MIR11141 precursor miRNA

Sequence

gcugggcucauuaauugacgugacaagggccACGUCAGCUGGCGGAGCUCCGGC
(((((((((.(((.((((((((........)))))))).)))..)))).)))))

Structure

     -    -a   a        aca 
gcugg gcuc  uua uugacgug   a
||||| ||||  ||| ||||||||    
CGGCC CGAG  GGU GACUGCAc   g
     U    GC   C        cgg 

Annotation confidence Not enough data

Genome context

Chr2: 30730742-30730795 [+]

Mature lja-miR11141-3p

• Accession: MIMAT0043918
• Description: Lotus japonicus lja-miR11141-3p mature miRNA
• Sequence: 32 - ACGUCAGCUGGCGGAGCUCCGGC - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256