Stem-loop lja-MIR11150

Accession

MI0035922

Description

Lotus japonicus lja-MIR11150 precursor miRNA

Sequence

gcacuuucaaagugcguuacuuaugcacuuucaaggugcguuacggucgcACUUUCGAGGUGAGUAGUUAACGCauuuuagagugc
(((((((.(((((((((((.((((.((((((.((((((((.......)))))))).)))))).)))).))))))))))))))))))

Structure

       c           c    g      c        uu 
gcacuuu aaagugcguua uuau cacuuu aaggugcg  a
||||||| ||||||||||| |||| |||||| ||||||||  c
cgugaga uuuuaCGCAAU GAUG GUGGAG UUUCAcgc  g
       -           U    A      C        ug 

Annotation confidence Not enough data

Genome context

Chr1: 29076005-29076090 [-]

Mature lja-miR11150-3p

• Accession: MIMAT0043944
• Description: Lotus japonicus lja-miR11150-3p mature miRNA
• Sequence: 51 - ACUUUCGAGGUGAGUAGUUAACGC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25967282
   micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules
   "Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K"
   "New Phytol (2015) 208:241-256