Stem-loop gmo-mir-8159

Accession

MI0036014

Description

Gadus morhua gmo-mir-8159 precursor miRNA

Sequence

4413 reads, 90.0 reads per million, 20 experiments

UCAGUAACUGGAAUCUGUCCCUgcugugugucuccgaucgcAGGGUCAGGCUGGUUACUGCAC
.((((((((((..((((.((((((.((.........)).)))))).))))))))))))))...

Structure

--U          AA    U      u  gug 
   CAGUAACUGG  UCUG CCCUgc gu   u
   ||||||||||  |||| |||||| ||   c
   GUCAUUGGUC  GGAC GGGAcg ua   u
CAC          --    U      c  gcc 

Annotation confidence High

Genome context

CAEA01423811.1: 195-257 [-]

Mature gmo-miR-8159-5p

• Accession: MIMAT0044067
• Description: Gadus morhua gmo-miR-8159-5p mature miRNA
• Sequence: 1 - UCAGUAACUGGAAUCUGUCCCU - 22
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-8159-3p

• Accession: MIMAT0060427
• Description: Gadus morhua gmo-miR-8159-3p mature miRNA
• Sequence: 42 - AGGGUCAGGCUGGUUACUGCAC - 63
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305