Stem-loop gmo-mir-23a-1

Accession

MI0036029

Description

Gadus morhua gmo-mir-23a-1 precursor miRNA

Sequence

63326 reads, 1076.0 reads per million, 20 experiments

GGGAUUCCCGGCAGAGUGAUUUuugagaauaagacacugaAUCACAUUGCCAGGGAUUUCCA
((((.(((((((((.(((((((................))))))).))))).)))).)))).

Structure

-    U    -     A       uugagaa 
 GGGA UCCC GGCAG GUGAUUU       u
 |||| |||| ||||| |||||||        
 CCUU AGGG CCGUU CACUAag       a
A    U    A     A       ucacaga 

Annotation confidence High

Genome context

CAEA01554743.1: 2401-2462 [+]

Mature gmo-miR-23a-1-5p

• Accession: MIMAT0060431
• Description: Gadus morhua gmo-miR-23a-1-5p mature miRNA
• Sequence: 1 - GGGAUUCCCGGCAGAGUGAUUU - 22
• Evidence: experimental ; Illumina [2]

Mature gmo-miR-23a-3p

• Accession: MIMAT0044005
• Description: Gadus morhua gmo-miR-23a-3p mature miRNA
• Sequence: 41 - AUCACAUUGCCAGGGAUUUCCA - 62
• Evidence: experimental ; SOLiD [1], Illumina [2]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305