Stem-loop gmo-mir-7a-1

Accession

MI0036057

Description

Gadus morhua gmo-mir-7a-1 precursor miRNA

Literature search

1 open access papers mention gmo-mir-7a-1
(8 sentences)

Sequence

19297 reads, 336.0 reads per million, 20 experiments

UGGAAGACUAGUGAUUUUGUUGUuuuuaguuagaugaaccgaCAACAAAUCACAGUCUGCCAA
(((.(((((.(((((((.((((((((((......))))..)))))))))))))))))).))).

Structure

-   A     A       U      --    gu 
 UGG AGACU GUGAUUU GUUGUu  uuua  u
 ||| ||||| ||||||| ||||||  ||||   
 ACC UCUGA CACUAAA CAACag  aagu  a
A   G     -       -      cc    ag 

Annotation confidence High

Genome context

HE567872.1: 120796-120858 [+]

Mature gmo-miR-7a-5p

• Accession: MIMAT0044123
• Description: Gadus morhua gmo-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-7a-1-3p

• Accession: MIMAT0060441
• Description: Gadus morhua gmo-miR-7a-1-3p mature miRNA
• Sequence: 43 - CAACAAAUCACAGUCUGCCAA - 63
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305