Stem-loop gmo-mir-181b-1

Accession

MI0036066

Description

Gadus morhua gmo-mir-181b-1 precursor miRNA

Literature search

1 open access papers mention gmo-mir-181b-1
(1 sentences)

Sequence

AACAUUCAUUGCUGUCGGUGGGUUuggcuaugaagaaaagCUCACUGAACGAUGAAUGCA
..(((((((((...(((((((((((..((....))..))))))))))).)))))))))..

Structure

AA         CUG           gg  a 
  CAUUCAUUG   UCGGUGGGUUu  cu u
  |||||||||   |||||||||||  ||  
  GUAAGUAGC   AGUCACUCgaa  ga g
AC         --A           aa  a 

Annotation confidence Not enough data

Genome context

HE571820.1: 1460149-1460208 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-181b-1

Mature gmo-miR-181b-5p

• Accession: MIMAT0044134
• Description: Gadus morhua gmo-miR-181b-5p mature miRNA
• Sequence: 1 - AACAUUCAUUGCUGUCGGUGGGUU - 24
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-181b-3p

• Accession: MIMAT0044135
• Description: Gadus morhua gmo-miR-181b-3p mature miRNA
• Sequence: 41 - CUCACUGAACGAUGAAUGCA - 60
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305