miRBase entry: gmo-mir-8825

Stem-loop gmo-mir-8825


Accession
MI0036070
Description
Gadus morhua gmo-mir-8825 precursor miRNA


Sequence

CAGGUCUGCUUGAAAUCUGUCUgaagggucagacugguuucccgcagcccugca
((((.((((..((((((.((((((....)))))).))))))..)))).))))..

Structure
--    U    UU      U      a 
  CAGG CUGC  GAAAUC GUCUga g
  |||| ||||  |||||| ||||||  
  gucc gacg  cuuugg cagacu g
ac    c    cc      u      g 


Annotation confidence Not enough data
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Genome context
CAEA01181749.1: 1207-1260 [-]

Database links

Mature gmo-miR-8825-5p

Accession MIMAT0044141
Description Gadus morhua gmo-miR-8825-5p mature miRNA
Sequence 1 - CAGGUCUGCUUGAAAUCUGUCU - 22
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305