Stem-loop gmo-mir-124-5

Accession

MI0036080

Description

Gadus morhua gmo-mir-124-5 precursor miRNA

Literature search

1 open access papers mention gmo-mir-124-5
(4 sentences)

Sequence

19709 reads, 434.0 reads per million, 13 experiments

UGUGUUCACAGUGGACCUUGAUUuaauuucaauacaauUAAGGCACGCGGUGAAUGCCa
.((((((((.(((..((((((((............))))))))..))).))))))))..

Structure

-U        A   GA        uaauu 
  GUGUUCAC GUG  CCUUGAUU     u
  |||||||| |||  ||||||||      
  CGUAAGUG CGC  GGAAUuaa     c
aC        G   AC        cauaa 

Annotation confidence High

Genome context

HE570573.1: 741933-741991 [-]

Mature gmo-miR-124-5-5p

• Accession: MIMAT0060447
• Description: Gadus morhua gmo-miR-124-5-5p mature miRNA
• Sequence: 1 - UGUGUUCACAGUGGACCUUGAUU - 23
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-124-3p

• Accession: MIMAT0044016
• Description: Gadus morhua gmo-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCC - 58
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305