Stem-loop gmo-mir-9-4

Accession

MI0036084

Description

Gadus morhua gmo-mir-9-4 precursor miRNA

Literature search

1 open access papers mention gmo-mir-9-4
(4 sentences)

Sequence

159189 reads, 2282.0 reads per million, 20 experiments

UCUUUGGUUAUCUAGCUGUAUGAguguucugcucgucAUAAAGCUAGAUAACCGAAAGU
..(((((((((((((((..((((((.....)))))).....)))))))))))))))...

Structure

-UC               ---GU      g 
   UUUGGUUAUCUAGCU     AUGAgu u
   |||||||||||||||     |||||| u
   AAGCCAAUAGAUCGA     ugcucg c
UGA               AAUAc      u 

Annotation confidence High

Genome context

HE570112.1: 412043-412101 [-]

Mature gmo-miR-9-5p

• Accession: MIMAT0044076
• Description: Gadus morhua gmo-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; SOLiD [1], Illumina [2]

Mature gmo-miR-9-3p

• Accession: MIMAT0044077
• Description: Gadus morhua gmo-miR-9-3p mature miRNA
• Sequence: 38 - AUAAAGCUAGAUAACCGAAAGU - 59
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305