Stem-loop gmo-mir-7a-2

Accession

MI0036118

Description

Gadus morhua gmo-mir-7a-2 precursor miRNA

Literature search

1 open access papers mention gmo-mir-7a-2
(8 sentences)

Sequence

18915 reads, 346.0 reads per million, 19 experiments

UGGAAGACUAGUGAUUUUGUUGUucuguaaaugaaccgaCAACAAGUCAUUGUCUUCCUUG
.(((((((.((((((((.((((((..((......)).)))))))))))))))))))))...

Structure

--U       U        U      cu  aa 
   GGAAGAC AGUGAUUU GUUGUu  gu  a
   ||||||| |||||||| ||||||  ||   
   CCUUCUG UUACUGAA CAACag  ca  u
GUU       -        -      -c  ag 

Annotation confidence Not enough data

Genome context

HE571991.1: 240683-240743 [-]

Mature gmo-miR-7a-5p

• Accession: MIMAT0044123
• Description: Gadus morhua gmo-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-7a-2-3p

• Accession: MIMAT0060442
• Description: Gadus morhua gmo-miR-7a-2-3p mature miRNA
• Sequence: 40 - CAACAAGUCAUUGUCUUCCUUG - 61
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305