Stem-loop gmo-mir-7a-3

Accession

MI0036167

Description

Gadus morhua gmo-mir-7a-3 precursor miRNA

Literature search

1 open access papers mention gmo-mir-7a-3
(8 sentences)

Sequence

19053 reads, 349.0 reads per million, 19 experiments

UGGAAGACUAGUGAUUUUGUUGUuguuaaauauugacuuucaugaCAACAAGUCUCUGUCUCCCUca
.((.((((.((.(((((.((((((((.(((.......))).))))))))))))).)))))).))...

Structure

--U  A    U  U     U        u   ua 
   GG AGAC AG GAUUU GUUGUugu aaa  u
   || |||| || ||||| |||||||| |||  u
   CC UCUG UC CUGAA CAACagua uuu  g
acU  C    -  U     -        c   ca 

Annotation confidence Not enough data

Genome context

HE567276.1: 470498-470564 [-]

Mature gmo-miR-7a-5p

• Accession: MIMAT0044123
• Description: Gadus morhua gmo-miR-7a-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-7a-3-3p

• Accession: MIMAT0060443
• Description: Gadus morhua gmo-miR-7a-3-3p mature miRNA
• Sequence: 46 - CAACAAGUCUCUGUCUCCCU - 65
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305