Stem-loop gmo-mir-138-1

Accession

MI0036201

Description

Gadus morhua gmo-mir-138-1 precursor miRNA

Sequence

AGCUGGUGUUGUGAAUCAGGCcgacgaccgacacuuugauuaccggcuacuucacaacaccagggu
..(((((((((((((...(((((..((.(((....))).))..)))))..)))))))))))))...

Structure

-AG             UCA     ac  c   c 
   CUGGUGUUGUGAA   GGCcg  ga cga a
   |||||||||||||   |||||  || |||  
   gaccacaacacuu   ucggc  uu guu c
ugg             -ca     ca  a   u 

Annotation confidence Not enough data

Genome context

HE571270.1: 52215-52280 [-]

Mature gmo-miR-138-5p

• Accession: MIMAT0044223
• Description: Gadus morhua gmo-miR-138-5p mature miRNA
• Sequence: 1 - AGCUGGUGUUGUGAAUCAGGC - 21
• Evidence: experimental ; SOLiD [1], Illumina [2]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305