Stem-loop gmo-mir-181b-2

Accession

MI0036211

Description

Gadus morhua gmo-mir-181b-2 precursor miRNA

Literature search

1 open access papers mention gmo-mir-181b-2
(1 sentences)

Sequence

380625 reads, 8316.0 reads per million, 20 experiments

AACAUUCAUUGCUGUCGGUGGGUuucugguugaaaugaCUCAUUGACGAAUGAAUGCAGA
..((((((((..((((((((((((((.....))...))))))))))))))))))))....

Structure

--AA        GC            ---  u 
    CAUUCAUU  UGUCGGUGGGUu   uc g
    ||||||||  ||||||||||||   || g
    GUAAGUAA  GCAGUUACUCag   ag u
AGAC        --            uaa  u 

Annotation confidence High

Genome context

HE570074.1: 251038-251097 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-181b-2

Mature gmo-miR-181b-5p

• Accession: MIMAT0044134
• Description: Gadus morhua gmo-miR-181b-5p mature miRNA
• Sequence: 1 - AACAUUCAUUGCUGUCGGUGGGU - 23
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-181b-2-3p

• Accession: MIMAT0060444
• Description: Gadus morhua gmo-miR-181b-2-3p mature miRNA
• Sequence: 39 - CUCAUUGACGAAUGAAUGCAGA - 60
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305