Stem-loop gmo-mir-11185

Accession

MI0036234

Description

Gadus morhua gmo-mir-11185 precursor miRNA

Sequence

99 reads, 3.0 reads per million, 15 experiments

AGAGGGCAAUAAUAUCACAUCUGugaaaagcugaugUGUGAUCUUUGUGUCCUCAGg
.(((((((...((..((((((.((.....)).))))))..)).....)))))))...

Structure

--A       --AUA  AU      U  g 
   GAGGGCA     AU  CACAUC Gu a
   |||||||     ||  |||||| || a
   CUCCUGU     UA  GUguag cg a
gGA       GUUUC  GU      u  a 

Annotation confidence High

Genome context

CAEA01001217.1: 1002-1058 [+]

Mature gmo-miR-11185-5p

• Accession: MIMAT0044343
• Description: Gadus morhua gmo-miR-11185-5p mature miRNA
• Sequence: 1 - AGAGGGCAAUAAUAUCACAUCUG - 23
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11185-3p

• Accession: MIMAT0060474
• Description: Gadus morhua gmo-miR-11185-3p mature miRNA
• Sequence: 37 - UGUGAUCUUUGUGUCCUCAG - 56
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305