Stem-loop gmo-mir-11190

Accession

MI0036239

Description

Gadus morhua gmo-mir-11190 precursor miRNA

Sequence

UCCUUGUUGGCCAUGAGCGGGcuguccgaggcacucgucucccgcucccgcuggugacugucgaccaggugacagg
.(((.(((((((((.((((((..((..(((((....)))))..)).)))))).)))...)))))).))).......

Structure

------U   U      ---   G      cu  cc     a 
       CCU GUUGGC   CAU AGCGGG  gu  gaggc c
       ||| ||||||   ||| ||||||  ||  |||||  
       gga cagcug   gug ucgccc  cg  cucug u
ggacagu   c      uca   g      -u  cc     c 

Annotation confidence Not enough data

Genome context

CAEA01153117.1: 152-227 [-]

Mature gmo-miR-11190-5p

• Accession: MIMAT0044349
• Description: Gadus morhua gmo-miR-11190-5p mature miRNA
• Sequence: 1 - UCCUUGUUGGCCAUGAGCGGG - 21
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305