Stem-loop gmo-mir-11194

Accession

MI0036244

Description

Gadus morhua gmo-mir-11194 precursor miRNA

Sequence

GGCAACAAUCCCAUUCUUCUCcuugucgcgguucaguauacuucacauugauguggacgcggaagaaccaggaacgucgga
(((.....(((..(((((((...((((.((..(((((.........)))))..)))))).)))))))...)))..)))...

Structure

---   AACAA   -CA       Ccu    g  gu     aua 
   GGC     UCC   UUCUUCU   uguc cg  ucagu   c
   |||     |||   |||||||   |||| ||  |||||   u
   cug     agg   aagaagg   gcag gu  aguua   u
agg   ---ca   acc       --c    -  gu     cac 

Annotation confidence Not enough data

Genome context

CAEA01213306.1: 184-264 [+]

Mature gmo-miR-11194-5p

• Accession: MIMAT0044355
• Description: Gadus morhua gmo-miR-11194-5p mature miRNA
• Sequence: 1 - GGCAACAAUCCCAUUCUUCUC - 21
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305