Stem-loop gmo-mir-11197

Accession

MI0036248

Description

Gadus morhua gmo-mir-11197 precursor miRNA

Sequence

aggcgucaggcggagcuccgcgaggcgucaggcggagcuccgcgaggcgucaggcGGAGCUCCGCGAGGCGUCAGG
.((((((..((((((((((((..((((((..((((....))))..))))))..))))))))))))..))))))...

Structure

--a      ag            ga      ag    a 
   ggcguc  gcggagcuccgc  ggcguc  gcgg g
   ||||||  ||||||||||||  ||||||  ||||  
   CUGCGG  CGCCUCGAGGcg  cugcgg  cgcc c
GGA      AG            ga      ag    u 

Annotation confidence Not enough data

Genome context

CAEA01278952.1: 672-747 [+]

Mature gmo-miR-11197-3p

• Accession: MIMAT0044360
• Description: Gadus morhua gmo-miR-11197-3p mature miRNA
• Sequence: 56 - GGAGCUCCGCGAGGCGUCAGG - 76
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305