Stem-loop gmo-mir-11199

Accession

MI0036250

Description

Gadus morhua gmo-mir-11199 precursor miRNA

Sequence

AGUGACUUAAUACAAUACACAGGGcaguguuuggugcuuugugugugucugugugacccucagugaccu
.((.(((..(((((((((((((((((........))))))))))))...))))).......))).))..

Structure

-A  G   -----UA     ---            gug 
  GU ACU       AUACA   AUACACAGGGca   u
  || |||       |||||   ||||||||||||    
  ca uga       ugugu   uguguguuucgu   u
uc  g   cucccag     cug            ggu 

Annotation confidence Not enough data

Genome context

CAEA01374166.1: 54-122 [+]

Mature gmo-miR-11199-5p

• Accession: MIMAT0044362
• Description: Gadus morhua gmo-miR-11199-5p mature miRNA
• Sequence: 1 - AGUGACUUAAUACAAUACACAGGG - 24
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305