Stem-loop gmo-mir-11200

Accession

MI0036251

Description

Gadus morhua gmo-mir-11200 precursor miRNA

Sequence

CGUGCUGCGCUCAAGUUGcgccuugauucagugggcuuaccugacguugcugugca
.((((.(((((((.((...((((.........))))..)).))).).))).)))).

Structure

C    U   - -   A  UGc    uga 
 GUGC GCG C UCA GU   gccu   u
 |||| ||| | ||| ||   ||||   u
 cgug cgu g agu ca   cggg   c
a    u   u c   c  -uu    uga 

Annotation confidence Not enough data

Genome context

CAEA01436663.1: 5-60 [-]

Mature gmo-miR-11200-5p

• Accession: MIMAT0044363
• Description: Gadus morhua gmo-miR-11200-5p mature miRNA
• Sequence: 1 - CGUGCUGCGCUCAAGUUG - 18
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305