Stem-loop gmo-mir-11201

Accession

MI0036252

Description

Gadus morhua gmo-mir-11201 precursor miRNA

Sequence

cggaggcuaaccguaccuuagcucucaguaccggaggcUAACUGUACCUUUAGCUCUCAGU
..((((((((..((((.(((((.(((.......))))))))..))))..))))).)))...

Structure

-cg   -     cc    -c     u   ag 
   gag gcuaa  guac  uuagc cuc  u
   ||| |||||  ||||  ||||| |||  a
   CUC CGAUU  CAUG  AAUcg gag  c
UGA   U     UC    UC     -   gc 

Annotation confidence Not enough data

Genome context

CAEA01467999.1: 164-224 [+]

Mature gmo-miR-11201-3p

• Accession: MIMAT0044364
• Description: Gadus morhua gmo-miR-11201-3p mature miRNA
• Sequence: 39 - UAACUGUACCUUUAGCUCUCAGU - 61
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305