Stem-loop gmo-mir-11204a

Accession

MI0036255

Description

Gadus morhua gmo-mir-11204a precursor miRNA

Sequence

321 reads, 7.0 reads per million, 20 experiments

UCUUUUCGCUCGGUUCUAGCCCUacugucgauacgGCGAACCGAGUGAAAAGACUA
((((((((((((((((..(((.............)))))))))))))))))))...

Structure

---                UA   CUacu 
   UCUUUUCGCUCGGUUC  GCC     g
   ||||||||||||||||  |||     u
   AGAAAAGUGAGCCAAG  CGg     c
AUC                --   cauag 

Annotation confidence High

Genome context

CAEA01488071.1: 182-237 [-]

Mature gmo-miR-11204a-5p

• Accession: MIMAT0060476
• Description: Gadus morhua gmo-miR-11204a-5p mature miRNA
• Sequence: 1 - UCUUUUCGCUCGGUUCUAGCCCU - 23
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11204a-3p

• Accession: MIMAT0044367
• Description: Gadus morhua gmo-miR-11204a-3p mature miRNA
• Sequence: 36 - GCGAACCGAGUGAAAAGACUA - 56
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305