Stem-loop gmo-mir-11209

Accession

MI0036261

Description

Gadus morhua gmo-mir-11209 precursor miRNA

Sequence

cguugacgucguccaucugugauuugcguucuccgaaUCACACCGAUGUCGUCAAAGGU
..((((((.((((....(((((((((.(....))))))))))..)))).))))))....

Structure

--cg      u    cauc         c u 
    uugacg cguc    ugugauuug g u
    |||||| ||||    ||||||||| |  
    AACUGC GUAG    ACACUaagc c c
UGGA      U    --CC         - u 

Annotation confidence Not enough data

Genome context

HE568072.1: 229257-229315 [-]

Mature gmo-miR-11209-3p

• Accession: MIMAT0044374
• Description: Gadus morhua gmo-miR-11209-3p mature miRNA
• Sequence: 38 - UCACACCGAUGUCGUCAAAGGU - 59
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305