Stem-loop gmo-mir-11210

Accession

MI0036262

Description

Gadus morhua gmo-mir-11210 precursor miRNA

Sequence

UGGUUAAUAAUAUGAUUGCCUUUGAucccagccagauguaguuAAAGGCGUCAUAUUAUACCAC
((((..((((((((((.(((((((((..((......))..))))))))))))))))))))))).

Structure

-    UA          U         cc  gc 
 UGGU  AUAAUAUGAU GCCUUUGAu  ca  c
 ||||  |||||||||| |||||||||  ||   
 ACCA  UAUUAUACUG CGGAAAuug  gu  a
C    --          -         au  ag 

Annotation confidence Low

Genome context

CAEA01381125.1: 2341-2404 [-]

Mature gmo-miR-11210-5p

• Accession: MIMAT0044375
• Description: Gadus morhua gmo-miR-11210-5p mature miRNA
• Sequence: 1 - UGGUUAAUAAUAUGAUUGCCUUUGA - 25
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11210-3p

• Accession: MIMAT0044376
• Description: Gadus morhua gmo-miR-11210-3p mature miRNA
• Sequence: 44 - AAAGGCGUCAUAUUAUACCAC - 64
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305