Stem-loop gmo-mir-11214

Accession

MI0036266

Description

Gadus morhua gmo-mir-11214 precursor miRNA

Sequence

AGCACAAAUUAUGAGUCUGCUcuucacgcaccguggcacauagugagcagaccauaauuaguguuuu
.((((.(((((((.((((((((.(((((...)))))........))))))))))))))).))))...

Structure

--A    A       A        -------u     c 
   GCAC AAUUAUG GUCUGCUc        ucacg  
   |||| ||||||| ||||||||        ||||| a
   ugug uuaauac cagacgag        ggugc  
uuu    a       -        ugauacac     c 

Annotation confidence Not enough data

Genome context

HE566600.1: 259800-259866 [-]

Mature gmo-miR-11214-5p

• Accession: MIMAT0044380
• Description: Gadus morhua gmo-miR-11214-5p mature miRNA
• Sequence: 1 - AGCACAAAUUAUGAGUCUGCU - 21
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305