Stem-loop gmo-mir-11241

Accession

MI0036299

Description

Gadus morhua gmo-mir-11241 precursor miRNA

Sequence

165 reads, 5.0 reads per million, 18 experiments

CAGAAGACCAUCAGGCAGCUCUgcccaucaguccagCGCUGCAUGUUGGUCUUCUGCU
((((((((((.((.(((((.(((..(....)..))).))))).)).))))))))))..

Structure

--          U  G     U   cc a 
  CAGAAGACCA CA GCAGC CUg  c u
  |||||||||| || ||||| |||  |  
  GUCUUCUGGU GU CGUCG gac  g c
UC          U  A     C   cu a 

Annotation confidence High

Genome context

HE568422.1: 289272-289329 [+]

Mature gmo-miR-11241-5p

• Accession: MIMAT0060481
• Description: Gadus morhua gmo-miR-11241-5p mature miRNA
• Sequence: 1 - CAGAAGACCAUCAGGCAGCUCU - 22
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11241-3p

• Accession: MIMAT0044418
• Description: Gadus morhua gmo-miR-11241-3p mature miRNA
• Sequence: 37 - CGCUGCAUGUUGGUCUUCUGCU - 58
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305