Stem-loop gmo-mir-7550

Accession

MI0036306

Description

Gadus morhua gmo-mir-7550 precursor miRNA

Literature search

1 open access papers mention gmo-mir-7550
(2 sentences)

Sequence

2226 reads, 48.0 reads per million, 20 experiments

cUCCGGCUCGAAGGACCAAuuUGGUCCUUCGAGCCGGAGua
((((((((((((((((((...))))))))))))))))))..

Structure

--                  A 
  cUCCGGCUCGAAGGACCA  
  |||||||||||||||||| u
  GAGGCCGAGCUUCCUGGU  
au                  u 

Annotation confidence High

Genome context

HE566380.1: 116247-116287 [-]

Mature gmo-miR-7550-5p

• Accession: MIMAT0044425
• Description: Gadus morhua gmo-miR-7550-5p mature miRNA
• Sequence: 2 - UCCGGCUCGAAGGACCAA - 19
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-7550-3p

• Accession: MIMAT0060483
• Description: Gadus morhua gmo-miR-7550-3p mature miRNA
• Sequence: 22 - UGGUCCUUCGAGCCGGAG - 39
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305