Stem-loop gmo-mir-11204c

Accession

MI0036312

Description

Gadus morhua gmo-mir-11204c precursor miRNA

Sequence

11759 reads, 220.0 reads per million, 20 experiments

AGUCUUUUCGCUCGGUACUCCGUGUcaacaguagggCUAGAACGGAGCGAAAAGAUUa
(((((((((((((.((.((((.((.(....))).))..)).)).))))))))))))).

Structure

-             G  A  --  G  U a 
 AGUCUUUUCGCUC GU CU  CC UG c a
 ||||||||||||| || ||  || || |  
 UUAGAAAAGCGAG CA GA  gg au g c
a             G  A  UC  g  - a 

Annotation confidence High

Genome context

HE566520.1: 224487-224544 [+]

Mature gmo-miR-11204c-5p

• Accession: MIMAT0060484
• Description: Gadus morhua gmo-miR-11204c-5p mature miRNA
• Sequence: 1 - AGUCUUUUCGCUCGGUACUCCGUGU - 25
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11204c-3p

• Accession: MIMAT0044432
• Description: Gadus morhua gmo-miR-11204c-3p mature miRNA
• Sequence: 37 - CUAGAACGGAGCGAAAAGAUU - 57
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305