Stem-loop gmo-mir-11270

Accession

MI0036331

Description

Gadus morhua gmo-mir-11270 precursor miRNA

Sequence

279 reads, 6.0 reads per million, 19 experiments

CAGUUACAUGCCCGAUCAUCAGUgauagaauuaaacaCUGAUGCGGUUAUUUAAUUGAU
((((((.(((.(((..((((((((...........))))))))))).))).))))))..

Structure

--      C   C   AU        auag 
  CAGUUA AUG CCG  CAUCAGUg    a
  |||||| ||| |||  ||||||||    a
  GUUAAU UAU GGC  GUAGUCac    u
UA      U   U   --        aaau 

Annotation confidence High

Genome context

HE570065.1: 14622-14680 [-]

Mature gmo-miR-11270-5p

• Accession: MIMAT0060485
• Description: Gadus morhua gmo-miR-11270-5p mature miRNA
• Sequence: 1 - CAGUUACAUGCCCGAUCAUCAGU - 23
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11270-3p

• Accession: MIMAT0044455
• Description: Gadus morhua gmo-miR-11270-3p mature miRNA
• Sequence: 38 - CUGAUGCGGUUAUUUAAUUGAU - 59
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305