Stem-loop gmo-mir-11276

Accession

MI0036337

Description

Gadus morhua gmo-mir-11276 precursor miRNA

Sequence

106 reads, 3.0 reads per million, 18 experiments

gAGUUCAGACCAGCACCAGGACuggucugaacuuugguCCUGGUGCUGGUCUGAACU
.((((((((((((((((((((((((........))))))))))))))))))))))))

Structure

g                        ucu 
 AGUUCAGACCAGCACCAGGACugg   g
 ||||||||||||||||||||||||    
 UCAAGUCUGGUCGUGGUCCugguu   a
-                        uca 

Annotation confidence Medium

Genome context

CAEA01106105.1: 497-553 [+]

Mature gmo-miR-11276-5p

• Accession: MIMAT0044462
• Description: Gadus morhua gmo-miR-11276-5p mature miRNA
• Sequence: 2 - AGUUCAGACCAGCACCAGGAC - 22
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11276-3p

• Accession: MIMAT0060488
• Description: Gadus morhua gmo-miR-11276-3p mature miRNA
• Sequence: 39 - CCUGGUGCUGGUCUGAACU - 57
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305