Stem-loop gmo-mir-11279

Accession

MI0036340

Description

Gadus morhua gmo-mir-11279 precursor miRNA

Sequence

CCAUCAUUGUUGCCAGAUUGgccagauuucccgcccaaucgauuggguuugaaaucaggccaaaucuggcaacacugauggug
((((((.((((((((((((((((.((((((..((((((....))))))..)))))).)))).)))))))))))).))))))..

Structure

--      U            -    a      cc      u 
  CCAUCA UGUUGCCAGAUU Ggcc gauuuc  gcccaa c
  |||||| |||||||||||| |||| ||||||  ||||||  
  gguagu acaacggucuaa ccgg cuaaag  uggguu g
gu      c            a    a      uu      a 

Annotation confidence Not enough data

Genome context

HE569320.1: 113031-113113 [-]

Mature gmo-miR-11279-5p

• Accession: MIMAT0044465
• Description: Gadus morhua gmo-miR-11279-5p mature miRNA
• Sequence: 1 - CCAUCAUUGUUGCCAGAUUG - 20
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305