Stem-loop gmo-mir-11280

Accession

MI0036341

Description

Gadus morhua gmo-mir-11280 precursor miRNA

Sequence

AUGAGAGAAGAUCCGUGUUCCUcaucacgucagucgagGAACACGGAUCAUAACUCACGU
.((((....((((((((((((((..(......)..))))))))))))))....))))...

Structure

--A    AGAA              au ac 
   UGAG    GAUCCGUGUUCCUc  c  g
   ||||    ||||||||||||||  |   
   ACUC    CUAGGCACAAGgag  g  u
UGC    AAUA              cu ac 

Annotation confidence Not enough data

Genome context

HE567065.1: 30149-30208 [+]

Mature gmo-miR-11280-5p

• Accession: MIMAT0044466
• Description: Gadus morhua gmo-miR-11280-5p mature miRNA
• Sequence: 1 - AUGAGAGAAGAUCCGUGUUCCU - 22
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11280-3p

• Accession: MIMAT0044467
• Description: Gadus morhua gmo-miR-11280-3p mature miRNA
• Sequence: 39 - GAACACGGAUCAUAACUCACGU - 60
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305