Stem-loop gmo-mir-11204d

Accession

MI0036343

Description

Gadus morhua gmo-mir-11204d precursor miRNA

Sequence

390 reads, 10.0 reads per million, 20 experiments

uAGUCUUUUCGCUCGGUUCUccgugucaacaguagggcUAGAACGGAGCAAAAAGACAA
..(((((((.((((.(((((((.((.(....))).))..))))).)))).)))))))..

Structure

uA       C    G     --  g  u a 
  GUCUUUU GCUC GUUCU  cc ug c a
  ||||||| |||| |||||  || || |  
  CAGAAAA CGAG CAAGA  gg au g c
AA       A    G     Uc  g  - a 

Annotation confidence Medium

Genome context

HE567724.1: 18872-18930 [+]

Mature gmo-miR-11204d-5p

• Accession: MIMAT0060489
• Description: Gadus morhua gmo-miR-11204d-5p mature miRNA
• Sequence: 2 - AGUCUUUUCGCUCGGUUCU - 20
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11204d-3p

• Accession: MIMAT0044469
• Description: Gadus morhua gmo-miR-11204d-3p mature miRNA
• Sequence: 39 - UAGAACGGAGCAAAAAGACAA - 59
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305