Stem-loop fve-MIR162

Accession

MI0036365

Description

Fragaria vesca fve-MIR162 precursor miRNA

Sequence

gguugugggauggagucacuGGAGGCAGCGGUUCAUCGAUCucuuccugagauuuuugucuguggaaaaaaagaaacacaaaaacaugaauaggUCGAUAAACCUCUGCAUCCAGcgcucacucacuauc
(((.(((((...(((.(.(((((.((((.((((.((((((((.(((.((((((....))))(((............))).....)).))).)))))))).)))).)))).))))).)))).))))).)))

Structure

   u     aug   u a     G    C    C        c   c  -----------------------    u 
ggu guggg   gag c cuGGA GCAG GGUU AUCGAUCu uuc ug                       agau u
||| |||||   ||| | ||||| |||| |||| |||||||| ||| ||                       ||||  
cua cacuc   cuc g GACCU CGUC CCAA UAGCUgga aag ac                       ucug u
   u     --a   - c     A    U    A        u   u  aaaaacacaaagaaaaaaaggug    u 

Annotation confidence Not enough data

Genome context

LG5: 8224745-8224874 [-]

Mature fve-miR162-5p

• Accession: MIMAT0044493
• Description: Fragaria vesca fve-miR162-5p mature miRNA
• Sequence: 21 - GGAGGCAGCGGUUCAUCGAUC - 41
• Evidence: experimental ; Illumina [1]

Mature fve-miR162-3p

• Accession: MIMAT0044494
• Description: Fragaria vesca fve-miR162-3p mature miRNA
• Sequence: 95 - UCGAUAAACCUCUGCAUCCAG - 115
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610