miRBase entry: 26143249

Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry

PubMed ID 26143249
Authors "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
Journal "Plant Physiol
Volume 169
Pages 594-610

There are 118 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
fve-MIR11283 MI0036346 None LG1 14111780 14111893 + High
fve-MIR11284 MI0036347 None LG2 20038989 20039079 + High
fve-MIR11285 MI0036348 None LG4 2714628 2714750 + High
fve-MIR1511 MI0036349 None LG5 1343325 1343441 - High
fve-MIR156b MI0036350 None LG3 29883628 29883716 + High
fve-MIR156a MI0036351 None LG3 29884140 29884268 + High
fve-MIR156c MI0036352 None LG3 5985819 5985907 - High
fve-MIR156e MI0036353 None LG2 21697955 21698090 - High
fve-MIR156d MI0036354 None LG2 18533979 18534073 + High
fve-MIR156f MI0036355 None LG3 29884562 29884692 + -
fve-MIR156g MI0036356 None LG5 10354925 10355014 - High
fve-MIR156h MI0036357 None LG1 192274 192390 + Medium
fve-MIR156i MI0036358 None LG3 5665328 5665458 - High
fve-MIR156j MI0036359 None LG3 5986597 5986685 - High
fve-MIR159a MI0036360 None LG5 10261604 10261800 - Low
fve-MIR159b MI0036361 None LG7 2338697 2338882 - Low
fve-MIR159c MI0036362 None LG6 2332525 2332740 + Low
fve-MIR160b MI0036363 None LG7 14469085 14469173 - High
fve-MIR160a MI0036364 None LG3 8106178 8106263 - High
fve-MIR162 MI0036365 None LG5 8224745 8224874 - High
fve-MIR164a MI0036366 None LG2 16008057 16008167 - High
fve-MIR164b MI0036367 None LG6 7425139 7425324 - High
fve-MIR164c MI0036368 None LG6 27395980 27396093 + High
fve-MIR166e MI0036369 None LG5 5707595 5707758 - High
fve-MIR166a MI0036370 None LG4 2653237 2653378 - High
fve-MIR166b MI0036371 None LG4 2660780 2660920 - High
fve-MIR166d MI0036372 None LG2 12452990 12453099 - Medium
fve-MIR166c MI0036373 None LG7 1205662 1205813 - High
fve-MIR166f MI0036374 None LG7 20072839 20072981 - High
fve-MIR167d MI0036375 None LG4 815457 815564 + Medium
fve-MIR167b MI0036376 None LG1 19844849 19844931 + -
fve-MIR167c MI0036377 None LG2 14554218 14554313 + Low
fve-MIR167a MI0036378 None LG2 14557555 14557673 + High
fve-MIR168 MI0036379 None LG5 13551511 13551649 - High
fve-MIR169a MI0036380 None LG3 8877628 8877767 - High
fve-MIR169b MI0036381 None LG3 8882608 8882742 - High
fve-MIR169c MI0036382 None LG3 1884275 1884380 - -
fve-MIR169d MI0036383 None LG5 4289807 4289973 - Medium
fve-MIR169e MI0036384 None LG4 6058710 6058800 - High
fve-MIR169f MI0036385 None LG4 6034885 6035039 - Medium
fve-MIR171a MI0036386 None LG6 34450103 34450211 - High
fve-MIR171d MI0036387 None LG2 19238745 19238860 - High
fve-MIR171e MI0036388 None LG5 9935591 9935705 + -
fve-MIR171g MI0036389 None LG5 4618684 4618781 - -
fve-MIR171c MI0036390 None LG3 514668 514769 - High
fve-MIR171h MI0036391 None LG6 34510904 34510991 - High
fve-MIR171b MI0036392 None LG7 20263051 20263181 + High
fve-MIR171f MI0036393 None LG1 2548850 2548963 - High
fve-MIR172b MI0036394 None LG7 13952785 13952893 + High
fve-MIR172c MI0036395 None LG3 23263564 23263679 + High
fve-MIR172a MI0036396 None LG2 14050578 14050710 + Medium
fve-MIR2109 MI0036397 None LG0 1732169 1732279 + High
fve-MIR2111c MI0036398 None LG3 8384946 8385039 - High
fve-MIR2111a MI0036399 None LG3 8387953 8388068 + High
fve-MIR2111b MI0036400 None LG6 5830062 5830184 - Medium
fve-MIR319 MI0036401 None LG1 2094279 2094390 + -
fve-MIR3627a MI0036402 None LG6 1809426 1809584 + High
fve-MIR3627b MI0036403 None LG6 1813136 1813263 + High
fve-MIR390a MI0036404 None LG3 20594756 20594872 - High
fve-MIR390b MI0036405 None LG6 7169990 7170104 + High
fve-MIR393b MI0036406 None LG7 21689011 21689120 + High
fve-MIR393a MI0036407 None LG7 16959667 16959790 + Medium
fve-MIR394 MI0036408 None LG2 19278017 19278126 + Medium
fve-MIR396b MI0036409 None LG1 2526777 2526911 - High
fve-MIR396a MI0036410 None LG3 1706973 1707079 - High
fve-MIR396c MI0036411 None LG1 2522051 2522187 + High
fve-MIR396d MI0036412 None LG0 9235892 9236025 + High
fve-MIR396e MI0036413 None LG4 20230624 20230782 - High
fve-MIR397 MI0036414 None LG3 2934926 2935064 - High
fve-MIR399a MI0036415 None LG5 958264 958390 - High
fve-MIR399b MI0036416 None LG3 5220240 5220359 + High
fve-MIR408 MI0036417 None LG1 12223023 12223113 - High
fve-MIR477a MI0036418 None LG5 2676771 2676921 + High
fve-MIR482a MI0036419 None LG4 464027 464122 - High
fve-MIR482b MI0036420 None LG6 2405273 2405439 + Low
fve-MIR482c MI0036421 None LG5 13604726 13604842 - Medium
fve-MIR482d MI0036422 None LG4 24750963 24751097 - Medium
fve-MIR5225 MI0036423 None LG6 1800796 1800935 - High
fve-MIR530 MI0036424 None LG6 9182132 9182267 + High
fve-MIR535a MI0036425 None LG2 10572490 10572620 + Medium
fve-MIR535b MI0036426 None LG2 10602901 10602987 + High
fve-MIR827 MI0036427 None LG1 658070 658186 - High
fve-MIR845 MI0036428 None LG5 1342707 1342818 - High
fve-MIR11286 MI0036429 None LG6 12165584 12165659 + -
fve-MIR11287 MI0036430 None LG1 14614355 14614448 - Medium
fve-MIR11288c MI0036431 None LG3 25353781 25353886 + High
fve-MIR11289 MI0036432 None LG1 6290557 6290680 - -
fve-MIR11290 MI0036433 None LG7 17981501 17981604 - High
fve-MIR11288a MI0036434 None LG3 25352228 25352319 + High
fve-MIR11291 MI0036435 None LG7 15528972 15529115 - High
fve-MIR11292 MI0036436 None LG3 12865237 12865331 - High
fve-MIR11293 MI0036437 None LG5 6824625 6824741 + High
fve-MIR11294 MI0036438 None LG6 25709178 25709384 - Medium
fve-MIR11295 MI0036439 None LG5 6590101 6590202 - High
fve-MIR11296 MI0036440 None LG7 9816992 9817112 - -
fve-MIR11297 MI0036441 None LG4 9651985 9652146 + Low
fve-MIR11298 MI0036442 None LG6 15969655 15969812 - Low
fve-MIR11299 MI0036443 None LG6 2213239 2213407 - Medium
fve-MIR11300 MI0036444 None LG7 9295599 9295726 - -
fve-MIR11301 MI0036445 None LG2 1429952 1430097 + High
fve-MIR11302 MI0036446 None LG4 21216321 21216497 + Low
fve-MIR11303 MI0036447 None LG2 20569546 20569657 + Medium
fve-MIR11304 MI0036448 None LG2 4312848 4312956 + High
fve-MIR11305 MI0036449 None LG7 7736984 7737040 - -
fve-MIR11306 MI0036450 None LG4 14285793 14285945 + -
fve-MIR11307 MI0036451 None LG6 33773749 33773870 + High
fve-MIR11308 MI0036452 None LG6 8026186 8026289 - High
fve-MIR11309 MI0036453 None LG0 4870673 4870872 + Medium
fve-MIR11310 MI0036454 None LG0 8842577 8842691 - Low
fve-MIR11311 MI0036455 None LG1 2848867 2848951 + -
fve-MIR11312 MI0036456 None LG5 2677133 2677234 + High
fve-MIR477b MI0036457 None LG6 12294818 12294944 - High
fve-MIR11313 MI0036458 None LG5 4966696 4966845 + Low
fve-MIR11314 MI0036459 None LG5 7294841 7294957 + -
fve-MIR11288b MI0036460 None LG3 25352641 25352750 + High
fve-MIR11288d MI0036461 None LG3 25355853 25356050 + Low
fve-MIR11288e MI0036462 None LG3 25359226 25359328 + High
fve-MIR11315 MI0036463 None LG5 14533821 14533945 - Medium



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