miRBase entry: fve-MIR160a

Stem-loop fve-MIR160a


Accession
MI0036364
Description
Fragaria vesca fve-MIR160a precursor miRNA


Sequence

10777 reads, 1026.0 reads per million, 18 experiments
uaUGCCUGGCUCCCUGUAUGCCAcaagcagaagccaaccucuuguugcuugguuuuuugugggugGCGUACGAGGAGCCAAGCAUA
(((((.(((((((.((((((((((..(((((((((((.(.......).)))).)))))))..)))))))))).))))))).)))))

Structure
     C       C          aa       -    c uc 
uaUGC UGGCUCC UGUAUGCCAc  gcagaag ccaa c  u
||||| ||||||| ||||||||||  ||||||| |||| |  u
AUACG ACCGAGG GCAUGCGgug  uguuuuu gguu g  g
     A       A          gg       u    c uu 


Annotation confidence High
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Genome context
LG3: 8106178-8106263 [-]

Database links

Mature fve-miR160a-5p

Accession MIMAT0044492
Description Fragaria vesca fve-miR160a-5p mature miRNA
Sequence 3 - UGCCUGGCUCCCUGUAUGCCA - 23
Evidence experimental
Illumina [1]

Mature fve-miR160a-3p

Accession MIMAT0060507
Description Fragaria vesca fve-miR160a-3p mature miRNA
Sequence 66 - GCGUACGAGGAGCCAAGCAUA - 86
Evidence experimental
unknown

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610