Stem-loop fve-MIR11304

Accession

MI0036448

Description

Fragaria vesca fve-MIR11304 precursor miRNA

Sequence

55171 reads, 4438.0 reads per million, 18 experiments

aaagagaucgcugccgaUAGUGUUUCAGCUUGACAAGuuuuguuuucccuuucacucagauauugggccaacuUGUCAAUCUGGAUCACUAUUCugcagccaucccuuu
((((.(((.(((((.(((((((.(((((.((((((((((.......(((..((.....))....)))..)))))))))).))))).)))))))..))))).))).))))

Structure

    a   c     -c       U     C          uuguuuu   --uu  a 
aaag gau gcugc  gaUAGUG UUCAG UUGACAAGuu       ccc    uc c
|||| ||| |||||  ||||||| ||||| ||||||||||       |||    || u
uuuc cua cgacg  UUAUCAC AGGUC AACUGUucaa       ggg    ag c
    c   c     uC       U     U          -----cc   uuau  a 

Annotation confidence High

Genome context

LG2: 4312848-4312956 [+]

Mature fve-miR11304-5p

• Accession: MIMAT0044587
• Description: Fragaria vesca fve-miR11304-5p mature miRNA
• Sequence: 18 - UAGUGUUUCAGCUUGACAAG - 37
• Evidence: experimental ; Illumina [1]

Mature fve-miR11304-3p

• Accession: MIMAT0060573
• Description: Fragaria vesca fve-miR11304-3p mature miRNA
• Sequence: 74 - UGUCAAUCUGGAUCACUAUUC - 94
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610