Stem-loop fve-MIR171e

Accession

MI0036388

Description

Fragaria vesca fve-MIR171e precursor miRNA

Sequence

7634 reads, 731.0 reads per million, 18 experiments

ggagucauuauauaUUCUUGGUGUUGGUGCGGUUCAACcucaccauugugccgauuaauaaccggagcuugaugguuUGAUUGAGCCGUGCCAAUAUCAGgaguaaggugucuuc
((((.((((...(((((((((((((((((((((((((.(..((((((((.(((.........))).))..))))))..).))))))))))))))))))))))))).)))).))))

Structure

    u    aua                         C uc      --  g   auu 
ggag cauu   uaUUCUUGGUGUUGGUGCGGUUCAA c  accauu  gu ccg   a
|||| ||||   ||||||||||||||||||||||||| |  ||||||  || |||   a
cuuc gugg   augagGACUAUAACCGUGCCGAGUU G  ugguag  cg ggc   u
    u    --a                         A Uu      uu  a   caa 

Annotation confidence Not enough data

Genome context

LG5: 9935591-9935705 [+]

Mature fve-miR171e-5p

• Accession: MIMAT0060525
• Description: Fragaria vesca fve-miR171e-5p mature miRNA
• Sequence: 15 - UUCUUGGUGUUGGUGCGGUUCAAC - 38
• Evidence: experimental ; unknown

Mature fve-miR171e-3p

• Accession: MIMAT0044520
• Description: Fragaria vesca fve-miR171e-3p mature miRNA
• Sequence: 78 - UGAUUGAGCCGUGCCAAUAUCAG - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610