Stem-loop fve-MIR396a

Accession

MI0036410

Description

Fragaria vesca fve-MIR396a precursor miRNA

Sequence

ugauccucuuuauaucuUUCCACAGCUUUCUUGAACUGcaucuagcauaagauaucugaucucugcaugcgGUUCAAUAAAGCUGUGGGAAGauacaaacagguuca
(((.(((.(((.(((((((((((((((((.(((((((((((...(((..((((.....)))).)))))))))))))).))))))))))))))))).))).))).)))

Structure

   u   c   a                 C           cua   ua    a 
uga ccu uuu uaucuUUCCACAGCUUU UUGAACUGcau   gca  agau u
||| ||| ||| ||||||||||||||||| |||||||||||   |||  |||| c
acu gga aaa auaGAAGGGUGUCGAAA AACUUGgcgua   cgu  ucua u
   u   c   c                 U           ---   -c    g 

Annotation confidence Not enough data

Genome context

LG3: 1706973-1707079 [-]

Mature fve-miR396a-5p

• Accession: MIMAT0044546
• Description: Fragaria vesca fve-miR396a-5p mature miRNA
• Sequence: 18 - UUCCACAGCUUUCUUGAACUG - 38
• Evidence: experimental ; Illumina [1]

Mature fve-miR396a-3p

• Accession: MIMAT0044547
• Description: Fragaria vesca fve-miR396a-3p mature miRNA
• Sequence: 72 - GUUCAAUAAAGCUGUGGGAAG - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610