Stem-loop fve-MIR11292

Accession

MI0036436

Description

Fragaria vesca fve-MIR11292 precursor miRNA

Sequence

988 reads, 105.0 reads per million, 18 experiments

ugcuaugguuccaacggCGGAGGCUUUGAAUCACAGUCAGgaacauaaaaugguucuggaUUGUAGUUCAGCGCCUCCGCCauugaucuuuagca
(((((.((.((.((.(((((((((.((((((.((((((.(((((........))))).)))))).)))))).))))))))).)))).)).)))))

Structure

     u  u  c  c         U      C      A     aua 
ugcua gg uc aa ggCGGAGGC UUGAAU ACAGUC Ggaac   a
||||| || || || ||||||||| |||||| |||||| |||||    
acgau uc ag uu CCGCCUCCG GACUUG UGUUag ucuug   a
     u  u  -  a         C      A      g     gua 

Annotation confidence High

Genome context

LG3: 12865237-12865331 [-]

Mature fve-miR11292-5p

• Accession: MIMAT0060562
• Description: Fragaria vesca fve-miR11292-5p mature miRNA
• Sequence: 18 - CGGAGGCUUUGAAUCACAGUCAG - 40
• Evidence: experimental ; unknown

Mature fve-miR11292-3p

• Accession: MIMAT0044575
• Description: Fragaria vesca fve-miR11292-3p mature miRNA
• Sequence: 61 - UUGUAGUUCAGCGCCUCCGCC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610