Stem-loop fve-MIR11285

Accession

MI0036348

Description

Fragaria vesca fve-MIR11285 precursor miRNA

Sequence

544155 reads, 41044.0 reads per million, 18 experiments

acgauucauuucauuagUCUAUUCAAAGAGAUGACUGUUgaagaggaagagucuuagagaaaacucucagauucuuucucgacguuCAGUCUCUCUUUGUAUAGAcuagugaauuggaaucgu
(((((((..(((((((((((((.((((((((.(((((.((..((((((((((((.((((....)))).))))))))))))..))..))))))))))))).)))))))))))))...)))))))

Structure

       -au             U        U     -U  aa            u    a 
acgauuc   uucauuagUCUAU CAAAGAGA GACUG  Ug  gaggaagagucu agag a
|||||||   ||||||||||||| |||||||| |||||  ||  |||||||||||| ||||  
ugcuaag   aagugaucAGAUA GUUUCUCU CUGAC  gc  cucuuucuuaga ucuc a
       guu             U        -     uu  ag            c    a 

Annotation confidence High

Genome context

LG4: 2714628-2714750 [+]

Mature fve-miR11285-5p

• Accession: MIMAT0044474
• Description: Fragaria vesca fve-miR11285-5p mature miRNA
• Sequence: 18 - UCUAUUCAAAGAGAUGACUGUU - 39
• Evidence: experimental ; Illumina [1]

Mature fve-miR11285-3p

• Accession: MIMAT0060493
• Description: Fragaria vesca fve-miR11285-3p mature miRNA
• Sequence: 87 - CAGUCUCUCUUUGUAUAGA - 105
• Evidence: experimental ; unknown

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610