miRBase entry: fve-MIR156i

Stem-loop fve-MIR156i


Accession
MI0036358
Description
Fragaria vesca fve-MIR156i precursor miRNA


Sequence

37399 reads, 3769.0 reads per million, 18 experiments
agcaugggagauguuguuguuggUGACAGAAGAUAGAGAGCACagauggaugauuugcaaauauaugcaucucacuccuuuguGCUCUCUAUGCUUCCUGUCAUCAGuguuagcacauacucuccuaggcu
(((.((((((((((((((((((((((((((((((((((((((((((.((((((..((((......))))..))).))))))))))))))))).))).))))))))))...))))).))).))))))).)))

Structure
   a       -   -     ---          -   -              u   -   uu    aa 
agc ugggaga ugu uguug   uuggUGACAG AAG AUAGAGAGCACaga gga uga  ugca  u
||| ||||||| ||| |||||   |||||||||| ||| |||||||||||||| ||| |||  ||||   
ucg auccucu aua acgau   GACUACUGUC UUC UAUCUCUCGuguuu ccu acu  acgu  a
   g       c   c     ugu          C   G              -   c   cu    au 


Annotation confidence High
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Genome context
LG3: 5665328-5665458 [-]

Database links

Mature fve-miR156i-5p

Accession MIMAT0044485
Description Fragaria vesca fve-miR156i-5p mature miRNA
Sequence 24 - UGACAGAAGAUAGAGAGCAC - 43
Evidence experimental
Illumina [1]

Mature fve-miR156i-3p

Accession MIMAT0060502
Description Fragaria vesca fve-miR156i-3p mature miRNA
Sequence 84 - GCUCUCUAUGCUUCCUGUCAUCAG - 107
Evidence experimental
unknown

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610