Stem-loop fve-MIR172b

Accession

MI0036394

Description

Fragaria vesca fve-MIR172b precursor miRNA

Sequence

11778 reads, 1156.0 reads per million, 18 experiments

gcggguGCAGCAUCAUCCAGAUUCACAgguuuuauuacugacauccucauuugaaucuuugagaugucaugaugauccgaguugAGAAUCUUGAUGAUGCUGCAUcagc
((.((((((((((((((.((((((.(((.((((((((.(((((((.(((..........))))))))))))))))...)).))).)))))).)))))))))))))).))

Structure

  g              C      A   g  ---      c       c   uuug 
gc gguGCAGCAUCAUC AGAUUC CAg uu   uuauua ugacauc uca    a
|| |||||||||||||| |||||| ||| ||   |||||| ||||||| |||     
cg cUACGUCGUAGUAG UCUAAG guu ag   aguagu acuguag agu    a
  a              U      A   g  ccu      -       -   uucu 

Annotation confidence High

Genome context

LG7: 13952785-13952893 [+]

Mature fve-miR172b-5p

• Accession: MIMAT0060528
• Description: Fragaria vesca fve-miR172b-5p mature miRNA
• Sequence: 7 - GCAGCAUCAUCCAGAUUCACA - 27
• Evidence: experimental ; unknown

Mature fve-miR172b-3p

• Accession: MIMAT0044528
• Description: Fragaria vesca fve-miR172b-3p mature miRNA
• Sequence: 85 - AGAAUCUUGAUGAUGCUGCAU - 105
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610