Stem-loop fve-MIR169c

Accession

MI0036382

Description

Fragaria vesca fve-MIR169c precursor miRNA

Sequence

247 reads, 25.0 reads per million, 14 experiments

uuuggUAGCCAAGGAUGACUUGCCUGcuccuccauugagguuuuccugcucuguauucaugguucaaagcucauguuuuggccaggcaagcauccuggcuaauuug
.....((((((.(((((.((((((((..((.....((((.(((....(((.((....)).)))..))).))))......)).))))))))))))))))))).....

Structure

uuugg      A     A        cu  -uccau    g   uccu   c  u 
     UAGCCA GGAUG CUUGCCUG  cc      ugag uuu    gcu ug a
     |||||| ||||| ||||||||  ||      |||| |||    ||| ||  
     aucggu ccuac gaacggac  gg      acuc aaa    ugg ac u
guuua      -     -        -c  uuuugu    g   --cu   u  u 

Annotation confidence Not enough data

Genome context

LG3: 1884275-1884380 [-]

Mature fve-miR169c-5p

• Accession: MIMAT0044514
• Description: Fragaria vesca fve-miR169c-5p mature miRNA
• Sequence: 6 - UAGCCAAGGAUGACUUGCCUG - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610