Accession
MI0036381
Description
Fragaria vesca
fve-MIR169b precursor miRNA
Sequence
367
reads,
36.0
reads per million, 14 experiments
caugaaaaaaggagucuaguuuggUAGCCAAGGAUGACUUGCCUGcuuccuaaaagagguucagucaauuaucaaaaccuaguuggguucucaGGCAGUCACCUUGGCUAACUugacaagcucuuuucucucaug
(((((..(((((((.((.(((.(((((((((((.(((((.(((((...(((((...(((((..(........)..)))))..)))))....)))))))))))))))))).))).))).)))))))))...)))))
(((((..(((((((.((.(((.(((((((((((.(((((.(((((...(((((...(((((..(........)..)))))..)))))....)))))))))))))))))).))).))).)))))))))...)))))
Structure
-aa u a u - A U -cuu aag ca uca
cauga aaaggag cu guu ggU AGCCAAGG UGACU GCCUG ccuaa agguu g a
||||| ||||||| || ||| ||| |||||||| ||||| ||||| ||||| ||||| |
guacu uuuucuc ga cag UCA UCGGUUCC ACUGA CGGac ggguu uccaa c u
cuc - a u A - - ucuu -ga aa uau
Annotation confidence
High
Do you think this miRNA is real?
Genome context
LG3: 8882608-8882742 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from fve-MIR169b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature fve-miR169b-5p
| Accession | MIMAT0044513 |
| Description | Fragaria vesca fve-miR169b-5p mature miRNA |
| Sequence | 25 - UAGCCAAGGAUGACUUGCCUG - 45 |
| Evidence |
experimental
Illumina [1] |
Mature fve-miR169b-3p
| Accession | MIMAT0060519 |
| Description | Fragaria vesca fve-miR169b-3p mature miRNA |
| Sequence | 94 - GGCAGUCACCUUGGCUAACU - 113 |
| Evidence |
experimental
unknown |
References
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